LOC_Os02g39330.1

Description : Chitinase 6 OS=Oryza sativa subsp. japonica (sp|q6k8r2|chi6_orysj : 471.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0000276 (SeedPlants) Phylogenetic Tree(s): OG_06_0000276_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g39330.1
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00244170	evm_27.TU.AmTr_v1...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	Archaeplastida
AT1G02360	No alias	Chitinase family protein	0.04	Archaeplastida
AT2G43570	CHI	chitinase, putative	0.04	Archaeplastida
AT2G43580	No alias	Chitinase family protein	0.06	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.05	Archaeplastida
AT3G47540	No alias	Chitinase family protein	0.03	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.05	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.03	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
Gb_02223	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
Gb_05672	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_07464	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_07465	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_10203	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os01g18400.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os04g41640.1	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
LOC_Os05g04690.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os06g51050.1	No alias	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
LOC_Os06g51060.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.05	Archaeplastida
MA_10313114g0010	No alias	Endochitinase B OS=Nicotiana tabacum...	0.02	Archaeplastida
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.07	Archaeplastida
MA_10430424g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_10431378g0020	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_10435326g0010	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_10435326g0020	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_18470g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.02	Archaeplastida
MA_18470g0020	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 201.0)	0.07	Archaeplastida
MA_191308g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_36141g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_4984466g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_656046g0010	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_80085g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.03	Archaeplastida
MA_8921185g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.05	Archaeplastida
MA_8960362g0010	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.05	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9682123g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Mp2g24440.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Archaeplastida
Mp4g20470.1	No alias	Basic endochitinase B OS=Arabidopsis thaliana...	0.03	Archaeplastida
Pp3c13_4480V3.1	No alias	Chitinase family protein	0.02	Archaeplastida
Pp3c16_17090V3.1	No alias	homolog of carrot EP3-3 chitinase	0.02	Archaeplastida
Smo426710	No alias	Endochitinase A OS=Zea mays	0.03	Archaeplastida
Smo443112	No alias	Basic endochitinase B OS=Arabidopsis thaliana	0.03	Archaeplastida
Solyc02g061770.4.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc02g082920.4.1	No alias	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc02g082930.3.1	No alias	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc04g072000.4.1	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc06g053380.3.1	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Solyc10g055800.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.04	Archaeplastida
Solyc10g055810.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc10g074440.2.1	No alias	Endochitinase OS=Solanum tuberosum (sp\|p05315\|chit_soltu : 491.0)	0.02	Archaeplastida
Zm00001e007715_P001	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 330.0)	0.04	Archaeplastida
Zm00001e007716_P001	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 455.0)	0.03	Archaeplastida
Zm00001e027534_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
Zm00001e030152_P001	No alias	Basic endochitinase A OS=Secale cereale...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008061	chitin binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005542	folic acid binding	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0009617	response to bacterium	IEP	Neighborhood
BP	GO:0009620	response to fungus	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0031406	carboxylic acid binding	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0042742	defense response to bacterium	IEP	Neighborhood
MF	GO:0043177	organic acid binding	IEP	Neighborhood
BP	GO:0043207	response to external biotic stimulus	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0050832	defense response to fungus	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051704	multi-organism process	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0072341	modified amino acid binding	IEP	Neighborhood
BP	GO:0098542	defense response to other organism	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:1901698	response to nitrogen compound	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	224	271
IPR000726	Glyco_hydro_19_cat	72	215
IPR001002	Chitin-bd_1	27	58

External Links

No external refs found!

LOC_Os02g39330.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation