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  5. LOC_Os02g39380.1

LOC_Os02g39380.1


Description : Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica (sp|q0dzp5|cml17_orysj : 226.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001071 (SeedPlants) Phylogenetic Tree(s): OG_06_0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39380.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G12310 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT1G24620 No alias EF hand calcium-binding protein family 0.08 Archaeplastida
AT1G66400 CML23 calmodulin like 23 0.03 Archaeplastida
AT2G43290 MSS3 Calcium-binding EF-hand family protein 0.05 Archaeplastida
AT3G07490 AGD11 ARF-GAP domain 11 0.03 Archaeplastida
AT3G56800 CAM3, acam-3 calmodulin 3 0.01 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.08 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.07 Archaeplastida
AT4G14640 AtCML8, CAM8 calmodulin 8 0.04 Archaeplastida
AT5G44460 CML43 calmodulin like 43 0.03 Archaeplastida
Cpa|evm.model.tig00021435.46 No alias No description available 0.01 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01004914001 No alias Probable calcium-binding protein CML13 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01018070001 No alias Calmodulin-like protein 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01025831001 No alias Calmodulin OS=Lilium longiflorum 0.03 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 Archaeplastida
Gb_28443 No alias Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g41540.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Archaeplastida
MA_10289213g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_103558g0010 No alias Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_13199g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_254754g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_27386g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 Archaeplastida
MA_51891g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
MA_52212g0010 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.01 Archaeplastida
MA_66990g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.04 Archaeplastida
Mp1g00920.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida
Mp1g22210.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Archaeplastida
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_6548V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c13_2400V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c13_2420V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c13_2440V3.1 No alias EF hand calcium-binding protein family 0.05 Archaeplastida
Pp3c14_8590V3.1 No alias calmodulin 5 0.03 Archaeplastida
Pp3c16_23390V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c24_2030V3.1 No alias calmodulin 5 0.02 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Pp3c3_5720V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c4_1800V3.1 No alias centrin2 0.02 Archaeplastida
Pp3c6_1770V3.1 No alias EF hand calcium-binding protein family 0.02 Archaeplastida
Pp3c6_23740V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.03 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.07 Archaeplastida
Solyc03g005240.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Solyc04g008000.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.06 Archaeplastida
Solyc05g050750.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc09g055880.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc10g077010.2.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Solyc11g044920.1.1 No alias Calmodulin-like protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e010984_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017290_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.09 Archaeplastida
Zm00001e027331_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035870_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.06 Archaeplastida
Zm00001e035910_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 8 69
IPR002048 EF_hand_dom 92 156
No external refs found!