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  5. AMTR_s00003p00024290

AMTR_s00003p00024290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.10

Description : Protein modification.protein folding and quality control.N-glycan-dependent machinery.CNX-CRT cycle.CRT lectin chaperone


Gene families : OG0001598 (Archaeplastida) Phylogenetic Tree(s): OG0001598_tree ,
OG_05_0001614 (LandPlants) Phylogenetic Tree(s): OG_05_0001614_tree ,
OG_06_0004831 (SeedPlants) Phylogenetic Tree(s): OG_06_0004831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00024290
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT1G09210 CRT1b, AtCRT1b calreticulin 1b 0.06 Archaeplastida
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.03 Archaeplastida
Cre01.g038400 No alias Protein modification.protein folding and quality... 0.04 Archaeplastida
GSVIVT01028114001 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
Gb_07615 No alias lectin chaperone (CRT) 0.03 Archaeplastida
LOC_Os07g14270.1 No alias lectin chaperone (CRT) 0.08 Archaeplastida
Solyc01g100380.4.1 No alias lectin chaperone (CRT) 0.04 Archaeplastida
Solyc04g048900.3.1 No alias lectin chaperone (CRT) 0.02 Archaeplastida
Zm00001e033207_P002 No alias lectin chaperone (CRT) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001580 Calret/calnex 24 335
No external refs found!