LOC_Os02g39540.1

Description : transcription factor (FAR1)

Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0000420 (SeedPlants) Phylogenetic Tree(s): OG_06_0000420_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g39540.1
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01011502001	No alias	RNA biosynthesis.transcriptional activation.FAR1...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	537	576
IPR018289	MULE_transposase_dom	257	350
IPR004330	FAR1_DNA_bnd_dom	54	137

External Links

No external refs found!