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  5. LOC_Os02g39710.1

LOC_Os02g39710.1


Description : transcription factor (BBX-CO)


Gene families : OG0000859 (Archaeplastida) Phylogenetic Tree(s): OG0000859_tree ,
OG_05_0001138 (LandPlants) Phylogenetic Tree(s): OG_05_0001138_tree ,
OG_06_0001151 (SeedPlants) Phylogenetic Tree(s): OG_06_0001151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39710.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00262710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
AT3G02380 COL2, ATCOL2 CONSTANS-like 2 0.11 Archaeplastida
AT5G15850 COL1, ATCOL1 CONSTANS-like 1 0.1 Archaeplastida
AT5G24930 ATCOL4, COL4 CONSTANS-like 4 0.05 Archaeplastida
AT5G57660 ATCOL5, COL5 CONSTANS-like 5 0.03 Archaeplastida
Cre12.g534100 No alias No description available 0.02 Archaeplastida
GSVIVT01029107001 No alias Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01036037001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
GSVIVT01036499001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.1 Archaeplastida
LOC_Os02g08150.1 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.03 Archaeplastida
Mp8g13470.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Pp3c2_31580V3.1 No alias CONSTANS-like 4 0.04 Archaeplastida
Pp3c7_25600V3.1 No alias CONSTANS-like 4 0.02 Archaeplastida
Smo185898 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Solyc02g089540.3.1 No alias transcription factor (BBX-CO) 0.07 Archaeplastida
Solyc07g006630.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc12g096500.2.1 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Zm00001e002319_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e007691_P001 No alias transcription factor (BBX-CO) 0.09 Archaeplastida
Zm00001e013804_P001 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e021565_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037706_P002 No alias Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e037873_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e040482_P001 No alias Transcription factor GHD7 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e041152_P001 No alias transcription factor (BBX-CO) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010402 CCT_domain 261 303
IPR000315 Znf_B-box 31 67
IPR000315 Znf_B-box 69 114
No external refs found!