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  5. LOC_Os02g40460.1

LOC_Os02g40460.1


Description : polynucleotide phosphorylase (PNP)


Gene families : OG0001869 (Archaeplastida) Phylogenetic Tree(s): OG0001869_tree ,
OG_05_0002404 (LandPlants) Phylogenetic Tree(s): OG_05_0002404_tree ,
OG_06_0006667 (SeedPlants) Phylogenetic Tree(s): OG_06_0006667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40460.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre04.g214501 No alias RNA processing.organelle machineries.ribonuclease... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008252 nucleotidase activity IEP Neighborhood
MF GO:0008253 5'-nucleotidase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003029 S1_domain 79 149
No external refs found!