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  5. LOC_Os02g40530.1

LOC_Os02g40530.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40530.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.03 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.04 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.04 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G27920 ATMYB0, ATGL1, GL1, MYB0 myb domain protein 0 0.03 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.03 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.04 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.03 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.05 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.04 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.04 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.04 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000219001 No alias No description available 0.03 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014454001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01024036001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01033648001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02997 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g49160.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g50680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g33150.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10048467g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_51173g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005550.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g099120.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020140_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028201_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 17 64
IPR001005 SANT/Myb 70 114
No external refs found!