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  5. LOC_Os02g40810.1

LOC_Os02g40810.1


Description : type-II-residues E3 ubiquitin ligase (PRT1)


Gene families : OG0003793 (Archaeplastida) Phylogenetic Tree(s): OG0003793_tree ,
OG_05_0005880 (LandPlants) Phylogenetic Tree(s): OG_05_0005880_tree ,
OG_06_0009430 (SeedPlants) Phylogenetic Tree(s): OG_06_0009430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40810.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Zm00001e015136_P002 No alias type-II-residues E3 ubiquitin ligase (PRT1) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 295 334
IPR027370 Znf-RING_LisH 181 215
No external refs found!