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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g41630.2 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| AMTR_s00024p00201930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| AMTR_s00024p00202590 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| AMTR_s00032p00159210 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AMTR_s00148p00088930 | evm_27.TU.AmTr_v1... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | Archaeplastida | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.13 | Archaeplastida | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.04 | Archaeplastida | |
| GSVIVT01015138001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.07 | Archaeplastida | |
| GSVIVT01016257001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024292001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024293001 | No alias | Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... | 0.04 | Archaeplastida | |
| GSVIVT01024299001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024303001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024306001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01024315001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | Archaeplastida | |
| GSVIVT01025214001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.13 | Archaeplastida | |
| Gb_01672 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_16672 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_21115 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Gb_31408 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Gb_41796 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| LOC_Os02g41670.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os04g43800.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| LOC_Os05g35290.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| LOC_Os11g48110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| MA_10086594g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_10429279g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.11 | Archaeplastida | |
| MA_189052g0010 | No alias | Phenylalanine ammonia-lyase OS=Pinus taeda... | 0.03 | Archaeplastida | |
| MA_44561g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| MA_632036g0010 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| MA_73113g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Mp1g05190.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g10060.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Mp4g14110.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp4g14140.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
| Mp4g14160.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14170.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Mp4g14210.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Mp7g14880.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Pp3c10_21810V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c14_11870V3.1 | No alias | PHE ammonia lyase 1 | 0.04 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.05 | Archaeplastida | |
| Pp3c21_7670V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c25_2620V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.05 | Archaeplastida | |
| Pp3c2_32330V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| Pp3c2_32410V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.06 | Archaeplastida | |
| Solyc00g500095.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Solyc00g500353.1.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.02 | Archaeplastida | |
| Solyc03g078280.3.1 | No alias | Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... | 0.02 | Archaeplastida | |
| Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.07 | Archaeplastida | |
| Solyc09g007910.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc09g007920.4.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Solyc10g011925.1.1 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e005064_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e007572_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Zm00001e015155_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.05 | Archaeplastida | |
| Zm00001e023031_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.09 | Archaeplastida | |
| Zm00001e023033_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Neighborhood |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Neighborhood |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Neighborhood |
| MF | GO:0004620 | phospholipase activity | IEP | Neighborhood |
| MF | GO:0004629 | phospholipase C activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009606 | tropism | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010274 | hydrotropism | IEP | Neighborhood |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016298 | lipase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 49 | 524 |
| No external refs found! |