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  5. LOC_Os02g41650.3

LOC_Os02g41650.3


Description : phenylalanine ammonia lyase (PAL)


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g41650.3
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.08 Archaeplastida
AMTR_s00024p00201930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AMTR_s00024p00202590 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AMTR_s00148p00088930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.1 Archaeplastida
AT3G10340 PAL4 phenylalanine ammonia-lyase 4 0.03 Archaeplastida
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.07 Archaeplastida
GSVIVT01006148001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01015138001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01016257001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024292001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024293001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 Archaeplastida
GSVIVT01024295001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024306001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01025214001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01025703001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.14 Archaeplastida
Gb_01672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_21115 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Gb_31408 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os04g43800.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_123220g0010 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
MA_189052g0010 No alias Phenylalanine ammonia-lyase OS=Pinus taeda... 0.04 Archaeplastida
MA_44561g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_632036g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_73113g0010 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp1g05220.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.09 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Mp7g14880.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.06 Archaeplastida
Pp3c14_11870V3.1 No alias PHE ammonia lyase 1 0.06 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.06 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.05 Archaeplastida
Pp3c1_18940V3.1 No alias PHE ammonia lyase 1 0.05 Archaeplastida
Pp3c21_7670V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.07 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.12 Archaeplastida
Solyc09g007910.4.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Solyc09g007920.4.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g086180.2.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Zm00001e007572_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e015155_P001 No alias phenylalanine ammonia lyase (PAL) 0.11 Archaeplastida
Zm00001e015156_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e015157_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e023031_P002 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.1 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 66 539
No external refs found!