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  5. LOC_Os02g42380.1

LOC_Os02g42380.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42380.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.03 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.03 Archaeplastida
AT5G08330 No alias TCP family transcription factor 0.03 Archaeplastida
AT5G41030 No alias TCP family transcription factor 0.04 Archaeplastida
LOC_Os11g07460.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
Pp3c10_20400V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.04 Archaeplastida
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc05g007420.2.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc08g080150.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc09g008030.1.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Solyc11g020670.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e003744_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.09 Archaeplastida
Zm00001e015821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e024509_P001 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e036117_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 53 139
No external refs found!