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  5. LOC_Os02g42850.2

LOC_Os02g42850.2


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0006247 (SeedPlants) Phylogenetic Tree(s): OG_06_0006247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42850.2
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.05 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT2G23290 MYB70, AtMYB70 myb domain protein 70 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.02 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.04 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.04 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.02 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.04 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.03 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.02 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G18770 AtMYB98, MYB98 myb domain protein 98 0.04 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.02 Archaeplastida
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.07 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01019945001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_09986 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_20309 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22064 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_23598 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os02g51799.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g25550.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g35660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g07640.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429682g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_140579g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_257850g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_3665g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_37851g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_8846750g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9684426g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c2_37040V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g088190.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g074920.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc08g008480.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e022280_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 69 113
No external refs found!