1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g42950.1

LOC_Os02g42950.1


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0006725 (LandPlants) Phylogenetic Tree(s): OG_05_0006725_tree ,
OG_06_0004255 (SeedPlants) Phylogenetic Tree(s): OG_06_0004255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42950.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00029420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.06 Archaeplastida
Zm00001e007412_P003 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012577_P001 No alias transcription factor (YABBY) 0.09 Archaeplastida
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.07 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 21 212
No external refs found!