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  5. LOC_Os02g43930.1

LOC_Os02g43930.1


Description : co-chaperone (Hsp40)


Gene families : OG0001328 (Archaeplastida) Phylogenetic Tree(s): OG0001328_tree ,
OG_05_0001193 (LandPlants) Phylogenetic Tree(s): OG_05_0001193_tree ,
OG_06_0001469 (SeedPlants) Phylogenetic Tree(s): OG_06_0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43930.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00054240 evm_27.TU.AmTr_v1... DnaJ protein homolog 2 OS=Allium porrum 0.03 Archaeplastida
AT3G44110 ATJ3, ATJ DNAJ homologue 3 0.03 Archaeplastida
Cre17.g701500 No alias DnaJ protein homolog ANJ1 OS=Atriplex nummularia 0.04 Archaeplastida
LOC_Os03g57340.1 No alias co-chaperone (Hsp40) 0.04 Archaeplastida
Mp5g00390.1 No alias co-chaperone (Hsp40) 0.03 Archaeplastida
Pp3c19_10440V3.1 No alias DNAJ homologue 2 0.02 Archaeplastida
Smo267228 No alias DnaJ protein homolog 2 OS=Allium porrum 0.03 Archaeplastida
Solyc04g009770.3.1 No alias co-chaperone (Hsp40) 0.05 Archaeplastida
Solyc05g055160.3.1 No alias co-chaperone (Hsp40) 0.07 Archaeplastida
Zm00001e005000_P002 No alias co-chaperone (Hsp40) 0.09 Archaeplastida
Zm00001e005924_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e011902_P001 No alias co-chaperone (Hsp40) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 13 71
IPR001305 HSP_DnaJ_Cys-rich_dom 148 214
IPR002939 DnaJ_C 122 343
No external refs found!