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  5. LOC_Os02g43940.1

LOC_Os02g43940.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43940.1
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00099690 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.02 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00111p00051610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015540001 No alias Cell wall.cutin and suberin.biosynthesis... 0.03 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.03 Archaeplastida
GSVIVT01033793001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01034563001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_35015 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.04 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g41760.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os07g12510.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os09g11460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_198113g0010 No alias Ethylene-responsive transcription factor 1A... 0.03 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_436575g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6677438g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_27710V3.1 No alias cytokinin response factor 2 0.02 Archaeplastida
Pp3c6_28370V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.03 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc12g005960.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.02 Archaeplastida
Zm00001e006692_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e015327_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015328_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e023157_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023686_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e031438_P002 No alias Ethylene-responsive transcription factor RAP2-3... 0.05 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e033541_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e040124_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 97 147
No external refs found!