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  5. LOC_Os02g44780.1

LOC_Os02g44780.1


Description : regulatory subunit of geranyl diphosphate synthase complex. isoprenyl diphosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0009623 (LandPlants) Phylogenetic Tree(s): OG_05_0009623_tree ,
OG_06_0006381 (SeedPlants) Phylogenetic Tree(s): OG_06_0006381_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g44780.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00175920 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.methylerythritol... 0.02 Archaeplastida
Gb_39712 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_10435368g0020 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
Solyc04g079960.1.1 No alias catalytic subunit of geranyl diphosphate synthase... 0.02 Archaeplastida
Zm00001e023206_P001 No alias regulatory subunit of geranyl diphosphate synthase... 0.03 Archaeplastida
Zm00001e025596_P001 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 87 274
No external refs found!