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  5. LOC_Os02g45054.1

LOC_Os02g45054.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45054.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00077430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.05 Archaeplastida
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.04 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01010283001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01016867001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01020612001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
GSVIVT01025658001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_18885 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os03g13400.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10426334g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c1_16920V3.1 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.03 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
Solyc02g085580.4.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc06g075250.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003968_P002 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 95 117
No external refs found!