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  5. LOC_Os02g45240.1

LOC_Os02g45240.1


Description : RING-H2-class E3 ligase


Gene families : OG0001009 (Archaeplastida) Phylogenetic Tree(s): OG0001009_tree ,
OG_05_0001347 (LandPlants) Phylogenetic Tree(s): OG_05_0001347_tree ,
OG_06_0001207 (SeedPlants) Phylogenetic Tree(s): OG_06_0001207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45240.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
MA_803378g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g091600.4.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 322 364
No external refs found!