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LOC_Os02g45540.1


Description : UDP-L-rhamnose synthase


Gene families : OG0000898 (Archaeplastida) Phylogenetic Tree(s): OG0000898_tree ,
OG_05_0005574 (LandPlants) Phylogenetic Tree(s): OG_05_0005574_tree ,
OG_06_0005340 (SeedPlants) Phylogenetic Tree(s): OG_06_0005340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g45540.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G78570 RHM1, ROL1, ATRHM1 rhamnose biosynthesis 1 0.04 Archaeplastida
AT3G14790 ATRHM3, RHM3 rhamnose biosynthesis 3 0.04 Archaeplastida
Cpa|evm.model.tig00020553.161 No alias Carbohydrate metabolism.nucleotide sugar... 0.01 Archaeplastida
Gb_35655 No alias UDP-L-rhamnose synthase 0.04 Archaeplastida
MA_10431083g0010 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Mp1g04880.1 No alias UDP-L-rhamnose synthase 0.02 Archaeplastida
Pp3c6_15300V3.1 No alias nucleotide-rhamnose synthase/epimerase-reductase 0.02 Archaeplastida
Solyc07g062130.3.1 No alias UDP-L-rhamnose synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 25 197
No external refs found!