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  5. LOC_Os02g46610.1

LOC_Os02g46610.1


Description : transcription factor (PLATZ)


Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000533 (LandPlants) Phylogenetic Tree(s): OG_05_0000533_tree ,
OG_06_0001021 (SeedPlants) Phylogenetic Tree(s): OG_06_0001021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g46610.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00211460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.05 Archaeplastida
AMTR_s00008p00208550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.02 Archaeplastida
AT1G21000 No alias PLATZ transcription factor family protein 0.02 Archaeplastida
AT1G32700 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT1G43000 No alias PLATZ transcription factor family protein 0.04 Archaeplastida
AT3G60670 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
AT4G17900 No alias PLATZ transcription factor family protein 0.03 Archaeplastida
GSVIVT01004782001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
GSVIVT01013149001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 Archaeplastida
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 Archaeplastida
Gb_29488 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Gb_39126 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Gb_40617 No alias transcription factor (PLATZ) 0.02 Archaeplastida
LOC_Os04g50120.1 No alias transcription factor (PLATZ) 0.04 Archaeplastida
Mp1g07250.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Mp3g06190.1 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.07 Archaeplastida
Solyc06g061240.4.1 No alias transcription factor (PLATZ) 0.03 Archaeplastida
Solyc08g005100.3.1 No alias transcription factor (PLATZ) 0.05 Archaeplastida
Zm00001e002426_P001 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e007100_P003 No alias transcription factor (PLATZ) 0.02 Archaeplastida
Zm00001e041404_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006734 DUF597 88 159
No external refs found!