Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.70
Description : Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component
Gene families : OG0006560 (Archaeplastida) Phylogenetic Tree(s): OG0006560_tree ,
OG_05_0008193 (LandPlants) Phylogenetic Tree(s): OG_05_0008193_tree ,
OG_06_0009486 (SeedPlants) Phylogenetic Tree(s): OG_06_0009486_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00003p00104860 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G01940 | AtCNFU1, NFU1 | NFU domain protein 1 | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005506 | iron ion binding | IEA | Interproscan |
BP | GO:0016226 | iron-sulfur cluster assembly | IEA | Interproscan |
MF | GO:0051536 | iron-sulfur cluster binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | Neighborhood |
BP | GO:0006378 | mRNA polyadenylation | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Neighborhood |
MF | GO:0031072 | heat shock protein binding | IEP | Neighborhood |
BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Neighborhood |
BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001075 | NIF_FeS_clus_asmbl_NifU_C | 35 | 98 |
No external refs found! |