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  5. AMTR_s00003p00117760

AMTR_s00003p00117760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.82

Description : Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0009047 (LandPlants) Phylogenetic Tree(s): OG_05_0009047_tree ,
OG_06_0006159 (SeedPlants) Phylogenetic Tree(s): OG_06_0006159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00117760
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.06 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
Gb_09959 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os05g04170.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g35400.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g079240.3.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc01g095750.2.1 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc01g109180.4.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g075770.3.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 78 547
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