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  5. LOC_Os02g48660.1

LOC_Os02g48660.1


Description : component RPL31 of LSU proteome component


Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree ,
OG_06_0002770 (SeedPlants) Phylogenetic Tree(s): OG_06_0002770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g48660.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00233860 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
AT2G19740 No alias Ribosomal protein L31e family protein 0.03 Archaeplastida
AT5G56710 No alias Ribosomal protein L31e family protein 0.13 Archaeplastida
Cpa|evm.model.tig00020703.20 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.3 Archaeplastida
Cre12.g489153 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01015251001 No alias 60S ribosomal protein L31 OS=Nicotiana glutinosa 0.21 Archaeplastida
GSVIVT01032061001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Gb_05851 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
Gb_24728 No alias component RPL31 of LSU proteome component 0.11 Archaeplastida
MA_14317g0010 No alias component RPL31 of LSU proteome component 0.14 Archaeplastida
Mp7g18320.1 No alias component RPL31 of LSU proteome component 0.23 Archaeplastida
Pp3c10_8090V3.1 No alias Ribosomal protein L31e family protein 0.16 Archaeplastida
Pp3c14_7550V3.1 No alias Ribosomal protein L31e family protein 0.19 Archaeplastida
Pp3c1_34390V3.1 No alias Ribosomal protein L31e family protein 0.17 Archaeplastida
Pp3c25_8980V3.1 No alias Ribosomal protein L31e family protein 0.06 Archaeplastida
Pp3c2_16490V3.1 No alias Ribosomal protein L31e family protein 0.19 Archaeplastida
Smo268515 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
Solyc05g008010.3.1 No alias component RPL31 of LSU proteome component 0.15 Archaeplastida
Solyc12g008720.2.1 No alias component RPL31 of LSU proteome component 0.2 Archaeplastida
Zm00001e003520_P001 No alias component RPL31 of LSU proteome component 0.18 Archaeplastida
Zm00001e023413_P001 No alias component RPL31 of LSU proteome component 0.22 Archaeplastida
Zm00001e036927_P001 No alias component RPL31 of LSU proteome component 0.3 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004827 proline-tRNA ligase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006433 prolyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 14 95
No external refs found!