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  5. LOC_Os02g49530.2

LOC_Os02g49530.2


Description : no hits & (original description: none)


Gene families : OG0004381 (Archaeplastida) Phylogenetic Tree(s): OG0004381_tree ,
OG_05_0004562 (LandPlants) Phylogenetic Tree(s): OG_05_0004562_tree ,
OG_06_0006149 (SeedPlants) Phylogenetic Tree(s): OG_06_0006149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g49530.2
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
AT1G16810 No alias unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... 0.04 Archaeplastida
Cre16.g686900 No alias No description available 0.05 Archaeplastida
Solyc12g099490.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e013440_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Neighborhood
CC GO:0000445 THO complex part of transcription export complex IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013865 DUF1754_euk 3 98
No external refs found!