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  5. LOC_Os02g50010.1

LOC_Os02g50010.1


Description : APO protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4a5|apo2_arath : 442.0)


Gene families : OG0000992 (Archaeplastida) Phylogenetic Tree(s): OG0000992_tree ,
OG_05_0001157 (LandPlants) Phylogenetic Tree(s): OG_05_0001157_tree ,
OG_06_0003046 (SeedPlants) Phylogenetic Tree(s): OG_06_0003046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50010.1
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00027190 evm_27.TU.AmTr_v1... APO protein 2, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_29513 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36551 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_136047g0010 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_931234g0010 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c1_33440V3.1 No alias Arabidopsis thaliana protein of unknown function (DUF794) 0.03 Archaeplastida
Solyc08g080250.4.1 No alias APO protein 1, chloroplastic OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e023481_P001 No alias APO protein 2, chloroplastic OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023342 APO_dom 78 277
IPR023342 APO_dom 312 426
No external refs found!