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  5. LOC_Os02g50570.1

LOC_Os02g50570.1


Description : group-I formin actin filament elongation factor


Gene families : OG0000460 (Archaeplastida) Phylogenetic Tree(s): OG0000460_tree ,
OG_05_0000315 (LandPlants) Phylogenetic Tree(s): OG_05_0000315_tree ,
OG_06_0000245 (SeedPlants) Phylogenetic Tree(s): OG_06_0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50570.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00125p00077260 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
AT1G24150 FH4, ATFH4 formin homologue 4 0.02 Archaeplastida
AT1G59910 No alias Actin-binding FH2 (formin homology 2) family protein 0.11 Archaeplastida
AT1G70140 ATFH8, FH8 formin 8 0.03 Archaeplastida
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Archaeplastida
AT5G48360 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Archaeplastida
LOC_Os03g10680.1 No alias Formin-like protein 8 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10431423g0010 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Mp5g03400.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Smo103199 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Solyc03g044060.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g046120.3.1 No alias group-I formin actin filament elongation factor 0.05 Archaeplastida
Solyc07g064010.3.1 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Solyc10g006540.4.1 No alias group-I formin actin filament elongation factor 0.06 Archaeplastida
Zm00001e012597_P001 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Zm00001e015771_P001 No alias group-I formin actin filament elongation factor 0.16 Archaeplastida
Zm00001e018960_P001 No alias group-I formin actin filament elongation factor 0.02 Archaeplastida
Zm00001e028560_P002 No alias group-I formin actin filament elongation factor 0.04 Archaeplastida
Zm00001e035421_P004 No alias group-I formin actin filament elongation factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015425 FH2_Formin 402 823
No external refs found!