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  5. LOC_Os02g50860.1

LOC_Os02g50860.1


Description : small GTPase (ROP)


Gene families : OG0000554 (Archaeplastida) Phylogenetic Tree(s): OG0000554_tree ,
OG_05_0000532 (LandPlants) Phylogenetic Tree(s): OG_05_0000532_tree ,
OG_06_0000373 (SeedPlants) Phylogenetic Tree(s): OG_06_0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g50860.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00186910 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.06 Archaeplastida
AT1G20090 ATRAC4, ARAC4,... RHO-related protein from plants 2 0.04 Archaeplastida
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.05 Archaeplastida
AT4G35950 RAC2, ARAC6,... RAC-like 6 0.03 Archaeplastida
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.07 Archaeplastida
GSVIVT01018319001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
GSVIVT01018729001 No alias Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
GSVIVT01020653001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
GSVIVT01021145001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
GSVIVT01024029001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 Archaeplastida
LOC_Os06g12790.1 No alias small GTPase (ROP) 0.04 Archaeplastida
MA_36432g0010 No alias small GTPase (ROP) 0.02 Archaeplastida
MA_948089g0010 No alias small GTPase (ROP) 0.02 Archaeplastida
Mp7g17540.1 No alias small GTPase (ROP) 0.02 Archaeplastida
Solyc01g088780.3.1 No alias small GTPase (ROP) 0.03 Archaeplastida
Solyc02g077400.4.1 No alias small GTPase (ROP) 0.05 Archaeplastida
Solyc07g020800.3.1 No alias small GTPase (ROP) 0.03 Archaeplastida
Zm00001e031297_P001 No alias small GTPase (ROP) 0.02 Archaeplastida
Zm00001e032127_P001 No alias small GTPase (ROP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 179
No external refs found!