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Description : alpha-class expansin
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0069607 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g51040.1 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00270650 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| AMTR_s00012p00230920 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| AMTR_s00072p00134750 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AMTR_s00077p00063420 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AMTR_s00168p00074090 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AT2G28950 | EXPA6, ATEXP6,... | expansin A6 | 0.04 | Archaeplastida | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.03 | Archaeplastida | |
| AT3G15370 | ATHEXP ALPHA... | expansin 12 | 0.02 | Archaeplastida | |
| AT4G38210 | ATEXPA20,... | expansin A20 | 0.03 | Archaeplastida | |
| AT5G02260 | EXP9, EXPA9,... | expansin A9 | 0.03 | Archaeplastida | |
| AT5G39280 | ATHEXP ALPHA ... | expansin A23 | 0.03 | Archaeplastida | |
| AT5G56320 | ATEXP14, EXPA14,... | expansin A14 | 0.02 | Archaeplastida | |
| GSVIVT01011437001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01016525001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| GSVIVT01024946001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01028474001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01033691001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01034162001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| GSVIVT01035233001 | No alias | Expansin-A13 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Gb_04404 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_07424 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_07439 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_20678 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Gb_33854 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os01g14660.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os02g16839.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os03g06050.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os03g31480.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os06g01920.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os10g30330.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os10g39110.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_10020g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_100868g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_10425823g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_14588g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_18265g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_70880g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_8784268g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp1g22700.1 | No alias | alpha-class expansin | 0.07 | Archaeplastida | |
| Mp2g18610.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g09760.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g12280.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp8g18860.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Pp3c12_4560V3.1 | No alias | expansin A9 | 0.06 | Archaeplastida | |
| Pp3c13_20360V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c14_18450V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c18_19660V3.1 | No alias | expansin A9 | 0.04 | Archaeplastida | |
| Pp3c18_19720V3.1 | No alias | expansin A1 | 0.05 | Archaeplastida | |
| Pp3c20_5780V3.1 | No alias | expansin A15 | 0.04 | Archaeplastida | |
| Pp3c21_1940V3.1 | No alias | expansin A9 | 0.05 | Archaeplastida | |
| Pp3c22_760V3.1 | No alias | expansin A1 | 0.02 | Archaeplastida | |
| Pp3c24_15400V3.1 | No alias | expansin A15 | 0.05 | Archaeplastida | |
| Pp3c3_16280V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c8_14900V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c8_870V3.1 | No alias | expansin A1 | 0.04 | Archaeplastida | |
| Smo231226 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo410512 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo90332 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo91129 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Solyc02g088100.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc03g031840.3.1 | No alias | No annotation | 0.03 | Archaeplastida | |
| Solyc03g115300.2.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc03g115310.1.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc03g115320.3.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Solyc03g115345.1.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Solyc04g081870.4.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc06g076220.3.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Solyc08g007780.3.1 | No alias | Putative expansin-A30 OS=Oryza sativa subsp. japonica... | 0.05 | Archaeplastida | |
| Solyc08g080060.4.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Solyc10g084780.3.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Solyc12g089380.2.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Zm00001e000429_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e003889_P001 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Zm00001e004714_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e004721_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e014220_P001 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Zm00001e036693_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e041376_P001 | No alias | alpha-class expansin | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| CC | GO:0033643 | host cell part | IEP | Neighborhood |
| CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
| CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| CC | GO:0044217 | other organism part | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |