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  5. LOC_Os02g51570.1

LOC_Os02g51570.1


Description : component PnsL4 of NDH lumen subcomplex L. protein folding catalyst (FKBP)


Gene families : OG0000455 (Archaeplastida) Phylogenetic Tree(s): OG0000455_tree ,
OG_05_0000843 (LandPlants) Phylogenetic Tree(s): OG_05_0000843_tree ,
OG_06_0000775 (SeedPlants) Phylogenetic Tree(s): OG_06_0000775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g51570.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00214510 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.03 Archaeplastida
AMTR_s00032p00221170 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.04 Archaeplastida
AMTR_s00066p00197970 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.02 Archaeplastida
AT2G43560 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.1 Archaeplastida
AT4G39710 FKBP16-2 FK506-binding protein 16-2 0.08 Archaeplastida
AT5G45680 ATFKBP13, FKBP13 FK506-binding protein 13 0.14 Archaeplastida
Cpa|evm.model.tig00020921.2 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
Cre10.g454250 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
Cre12.g530300 No alias Protein modification.protein folding and quality... 0.04 Archaeplastida
GSVIVT01012171001 No alias Protein modification.protein folding and quality... 0.08 Archaeplastida
GSVIVT01022183001 No alias Protein modification.protein folding and quality... 0.09 Archaeplastida
GSVIVT01038097001 No alias Protein modification.protein folding and quality... 0.1 Archaeplastida
MA_91136g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_929563g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g06290.1 No alias protein folding catalyst (FKBP) 0.04 Archaeplastida
Mp6g04000.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Pp3c1_3210V3.1 No alias FK506-binding protein 13 0.03 Archaeplastida
Pp3c4_8140V3.1 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.04 Archaeplastida
Solyc04g015040.3.1 No alias protein folding catalyst (FKBP) 0.06 Archaeplastida
Solyc04g054520.3.1 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.09 Archaeplastida
Solyc08g006540.4.1 No alias protein folding catalyst (FKBP) 0.06 Archaeplastida
Zm00001e015866_P001 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.11 Archaeplastida
Zm00001e037726_P001 No alias protein folding catalyst (FKBP) 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016778 diphosphotransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 127 225
No external refs found!