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  5. LOC_Os02g51620.1

LOC_Os02g51620.1


Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0002964 (SeedPlants) Phylogenetic Tree(s): OG_06_0002964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g51620.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AMTR_s00045p00064060 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
AMTR_s00045p00064880 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
AMTR_s00057p00049120 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.02 Archaeplastida
AT1G78060 No alias Glycosyl hydrolase family protein 0.02 Archaeplastida
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
GSVIVT01017658001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01028104001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 Archaeplastida
Gb_34864 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os01g19220.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
LOC_Os04g44840.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
LOC_Os04g54810.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida
LOC_Os11g19160.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_140124g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Mp5g02880.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Solyc04g072850.4.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e008876_P002 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
Zm00001e015868_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR026891 Fn3-like 703 772
IPR002772 Glyco_hydro_3_C 405 634
IPR001764 Glyco_hydro_3_N 111 361
No external refs found!