LOC_Os02g53530.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000307 (SeedPlants) Phylogenetic Tree(s): OG_06_0000307_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g53530.1
Cluster HCCA: Cluster_362

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G68480 JAG C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.02 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT4G17810 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
MA_113057g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc05g009170.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g053720.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g061160.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e003962_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016020_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e034092_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!