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  5. LOC_Os02g54470.1

LOC_Os02g54470.1


Description : component RPL35a of LSU proteome component


Gene families : OG0001985 (Archaeplastida) Phylogenetic Tree(s): OG0001985_tree ,
OG_05_0001931 (LandPlants) Phylogenetic Tree(s): OG_05_0001931_tree ,
OG_06_0002428 (SeedPlants) Phylogenetic Tree(s): OG_06_0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54470.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT1G07070 No alias Ribosomal protein L35Ae family protein 0.17 Archaeplastida
AT1G41880 No alias Ribosomal protein L35Ae family protein 0.27 Archaeplastida
AT1G74270 No alias Ribosomal protein L35Ae family protein 0.25 Archaeplastida
AT3G55750 No alias Ribosomal protein L35Ae family protein 0.1 Archaeplastida
Cpa|evm.model.tig00020723.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.3 Archaeplastida
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.32 Archaeplastida
GSVIVT01016386001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01034025001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
Gb_35488 No alias component RPL35a of LSU proteome component 0.18 Archaeplastida
LOC_Os05g48310.1 No alias component RPL35a of LSU proteome component 0.01 Archaeplastida
MA_79041g0010 No alias component RPL35a of LSU proteome component 0.07 Archaeplastida
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.3 Archaeplastida
Pp3c11_9630V3.1 No alias Ribosomal protein L35Ae family protein 0.27 Archaeplastida
Pp3c13_8360V3.1 No alias Ribosomal protein L35Ae family protein 0.3 Archaeplastida
Pp3c1_4030V3.1 No alias Ribosomal protein L35Ae family protein 0.14 Archaeplastida
Pp3c3_3480V3.1 No alias Ribosomal protein L35Ae family protein 0.26 Archaeplastida
Pp3c4_29970V3.1 No alias Ribosomal protein L35Ae family protein 0.13 Archaeplastida
Pp3c7_17970V3.1 No alias Ribosomal protein L35Ae family protein 0.28 Archaeplastida
Smo184773 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Solyc03g096360.4.1 No alias component RPL35a of LSU proteome component 0.14 Archaeplastida
Solyc05g052800.3.1 No alias component RPL35a of LSU proteome component 0.35 Archaeplastida
Solyc05g052810.4.1 No alias component RPL35a of LSU proteome component 0.28 Archaeplastida
Zm00001e009729_P001 No alias component RPL35a of LSU proteome component 0.44 Archaeplastida
Zm00001e023741_P003 No alias component RPL35a of LSU proteome component 0.28 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 12 106
No external refs found!