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  5. LOC_Os02g54540.1

LOC_Os02g54540.1


Description : Pathogenesis-related protein PR-1 OS=Medicago truncatula (sp|q40374|pr1_medtr : 187.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54540.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.03 Archaeplastida
AT2G19970 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.08 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.13 Archaeplastida
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 Archaeplastida
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.1 Archaeplastida
AT5G26130 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.08 Archaeplastida
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
GSVIVT01025577001 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.04 Archaeplastida
GSVIVT01036997001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
GSVIVT01038540001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
Gb_11053 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Gb_11054 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
LOC_Os02g54560.1 No alias Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 Archaeplastida
LOC_Os07g03279.1 No alias Basic form of pathogenesis-related protein 1... 0.05 Archaeplastida
LOC_Os07g03458.1 No alias Basic form of pathogenesis-related protein 1... 0.05 Archaeplastida
LOC_Os07g03580.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 Archaeplastida
LOC_Os07g03610.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_171461g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_175771g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_178424g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_30959g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_317009g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_54271g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_66540g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_77819g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_96764g0010 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 146.0) 0.02 Archaeplastida
Mp3g14100.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g14110.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g14130.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Pp3c11_1180V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 Archaeplastida
Solyc01g106640.2.1 No alias Basic form of pathogenesis-related protein 1... 0.04 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 Archaeplastida
Solyc07g006710.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e002028_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.04 Archaeplastida
Zm00001e008453_P001 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 Archaeplastida
Zm00001e016073_P001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.09 Archaeplastida
Zm00001e016075_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
Zm00001e026690_P001 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e033272_P001 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 44 160
No external refs found!