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  5. LOC_Os02g54560.1

LOC_Os02g54560.1


Description : Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare (sp|p35793|pr13_horvu : 141.0)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0000056 (LandPlants) Phylogenetic Tree(s): OG_05_0000056_tree ,
OG_06_0000073 (SeedPlants) Phylogenetic Tree(s): OG_06_0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54560.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 Archaeplastida
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.06 Archaeplastida
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 Archaeplastida
AMTR_s00059p00174680 evm_27.TU.AmTr_v1... STS14 protein OS=Solanum tuberosum 0.02 Archaeplastida
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 Archaeplastida
GSVIVT01003762001 No alias STS14 protein OS=Solanum tuberosum 0.06 Archaeplastida
GSVIVT01025577001 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01029124001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01037011001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
GSVIVT01038540001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 Archaeplastida
Gb_01098 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 160.0) 0.03 Archaeplastida
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.03 Archaeplastida
Gb_11053 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
Gb_11054 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Gb_20955 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.02 Archaeplastida
LOC_Os01g28500.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.05 Archaeplastida
LOC_Os02g54530.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os02g54540.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os04g22210.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_10356677g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 Archaeplastida
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
MA_171461g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_175771g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_178424g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_317009g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 Archaeplastida
MA_77819g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_85698g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_907632g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Mp1g08990.1 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 Archaeplastida
Mp3g14110.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp3g14130.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp4g16750.1 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g12540.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.06 Archaeplastida
Mp6g06360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 Archaeplastida
Mp7g06810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 Archaeplastida
Mpzg00750.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Mpzg00760.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 Archaeplastida
Pp3c11_1180V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 Archaeplastida
Pp3c17_17400V3.1 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Archaeplastida
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 Archaeplastida
Smo230161 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 Archaeplastida
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 Archaeplastida
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.02 Archaeplastida
Solyc01g106600.2.1 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
Solyc02g065470.1.1 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 284.0) 0.03 Archaeplastida
Solyc09g006005.1.1 No alias Pathogenesis-related leaf protein 4 OS=Solanum... 0.03 Archaeplastida
Solyc10g048100.3.1 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 Archaeplastida
Zm00001e008453_P001 No alias Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 Archaeplastida
Zm00001e016073_P001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
Zm00001e023732_P001 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 Archaeplastida
Zm00001e032607_P001 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 64 187
No external refs found!