LOC_Os02g55340.1

Description : protein kinase (VPS15). regulatory component VPS15 of PI3-kinase vesicle nucleation complex I/II

Gene families : OG0003925 (Archaeplastida) Phylogenetic Tree(s): OG0003925_tree ,
OG_05_0004850 (LandPlants) Phylogenetic Tree(s): OG_05_0004850_tree ,
OG_06_0006877 (SeedPlants) Phylogenetic Tree(s): OG_06_0006877_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g55340.1
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
AT4G29380	No alias	protein kinase family protein / WD-40 repeat family protein	0.04	Archaeplastida
Cre06.g290500	No alias	Vesicle trafficking.endomembrane trafficking.PI3-kinase...	0.04	Archaeplastida
GSVIVT01015287001	No alias	Vesicle trafficking.endomembrane trafficking.PI3-kinase...	0.05	Archaeplastida
Gb_24425	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.02	Archaeplastida
Gb_24427	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.03	Archaeplastida
MA_10195045g0010	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.02	Archaeplastida
MA_10195045g0020	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.03	Archaeplastida
Pp3c15_10000V3.1	No alias	protein kinase family protein / WD-40 repeat family protein	0.05	Archaeplastida
Pp3c9_3860V3.1	No alias	protein kinase family protein / WD-40 repeat family protein	0.05	Archaeplastida
Solyc04g012170.4.1	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.04	Archaeplastida
Zm00001e016126_P001	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.05	Archaeplastida
Zm00001e023688_P001	No alias	protein kinase (VPS15). regulatory component VPS15 of...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0002790	peptide secretion	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003684	damaged DNA binding	IEP	Neighborhood
CC	GO:0005887	integral component of plasma membrane	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006914	autophagy	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	1074	1110
IPR000719	Prot_kinase_dom	71	332
IPR000357	HEAT	580	605

External Links

No external refs found!

LOC_Os02g55340.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation