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  5. LOC_Os02g55380.1

LOC_Os02g55380.1


Description : transcription factor (ERF)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001872 (SeedPlants) Phylogenetic Tree(s): OG_06_0001872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g55380.1
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00133970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00010p00095120 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.02 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00034p00206140 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00049p00214620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00095p00096190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00099p00122430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.04 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Archaeplastida
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G71450 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 Archaeplastida
AT2G40220 ABI4, SAN5,... Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 Archaeplastida
AT4G11140 CRF1 cytokinin response factor 1 0.04 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 Archaeplastida
AT5G11190 SHN3 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.03 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G19790 RAP2.11 related to AP2 11 0.03 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.03 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01013905001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013913001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01013920001 No alias No description available 0.03 Archaeplastida
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01014291001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.03 Archaeplastida
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01020584001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01022076001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028315001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01030515001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01031388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.03 Archaeplastida
GSVIVT01033793001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 Archaeplastida
GSVIVT01035852001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_03368 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_08437 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_08642 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.02 Archaeplastida
Gb_08781 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_09495 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_11793 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_12583 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_17988 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_24048 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_24321 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24326 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_25978 No alias Ethylene-responsive transcription factor ABI4... 0.03 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41294 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_41433 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os03g08470.1 No alias Ethylene-responsive transcription factor 1 OS=Oryza... 0.04 Archaeplastida
LOC_Os03g09170.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g55520.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
LOC_Os08g41030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_103035g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10343854g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10427743g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430769g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10432141g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_104992g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_12671g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_132427g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_134453g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_137148g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_15251g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_164803g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_168025g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_364562g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_40048g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_5629699g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_5730259g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6677438g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_67585g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_78784g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_82481g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9260020g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9812198g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g00380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Mp6g08690.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.03 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_28290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Smo104978 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g057080.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc01g090345.1.1 No alias Ethylene-responsive transcription factor 13... 0.03 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc01g091760.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc02g067020.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc02g077360.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005510.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc03g114440.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.03 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc04g007170.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g071770.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc05g051180.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052030.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g076370.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc11g011750.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc11g042580.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g008350.3.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e000611_P001 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.02 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.02 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e014413_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e014415_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e015327_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e015430_P001 No alias Dehydration-responsive element-binding protein 1G... 0.03 Archaeplastida
Zm00001e015968_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e023157_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.05 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.06 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.05 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.04 Archaeplastida
Zm00001e032032_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e034661_P001 No alias Ethylene-responsive transcription factor ERF115... 0.03 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039555_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041288_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e041781_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 55
No external refs found!