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  5. LOC_Os02g56260.1

LOC_Os02g56260.1


Description : no hits & (original description: none)


Gene families : OG0002352 (Archaeplastida) Phylogenetic Tree(s): OG0002352_tree ,
OG_05_0003000 (LandPlants) Phylogenetic Tree(s): OG_05_0003000_tree ,
OG_06_0006203 (SeedPlants) Phylogenetic Tree(s): OG_06_0006203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56260.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
MA_10347438g0010 No alias No annotation 0.03 Archaeplastida
MA_5587g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_875703g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_5960V3.1 No alias glycosyltransferase family protein 2 0.05 Archaeplastida
Pp3c4_16750V3.1 No alias glycosyltransferase family protein 2 0.03 Archaeplastida
Smo109643 No alias No description available 0.01 Archaeplastida
Solyc06g075100.3.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Solyc11g069560.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e016167_P001 No alias no hits & (original description: none) 0.24 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!