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  5. LOC_Os02g56480.1

LOC_Os02g56480.1


Description : no hits & (original description: none)


Gene families : OG0000459 (Archaeplastida) Phylogenetic Tree(s): OG0000459_tree ,
OG_05_0000294 (LandPlants) Phylogenetic Tree(s): OG_05_0000294_tree ,
OG_06_0017532 (SeedPlants) Phylogenetic Tree(s): OG_06_0017532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56480.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00204490 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G70640 No alias octicosapeptide/Phox/Bem1p (PB1) domain-containing protein 0.03 Archaeplastida
AT2G01190 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Archaeplastida
AT5G49920 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Archaeplastida
AT5G63130 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Archaeplastida
AT5G64430 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Archaeplastida
Solyc04g076820.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e023620_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027014_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000270 PB1_dom 56 155
No external refs found!