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  5. LOC_Os02g56600.1

LOC_Os02g56600.1


Description : transcription factor (NAC)


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0004626 (SeedPlants) Phylogenetic Tree(s): OG_06_0004626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g56600.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00193150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AMTR_s00003p00252470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00017p00255350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00025p00174590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00037p00144010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
AMTR_s00092p00142980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AMTR_s00113p00077540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AMTR_s00119p00045570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
AMTR_s00149p00068500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.02 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.02 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.04 Archaeplastida
AT1G52880 ANAC018, NAM,... NAC (No Apical Meristem) domain transcriptional... 0.07 Archaeplastida
AT1G52890 ANAC019, NAC019 NAC domain containing protein 19 0.04 Archaeplastida
AT1G61110 NAC025, anac025 NAC domain containing protein 25 0.04 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.02 Archaeplastida
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.03 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.02 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.03 Archaeplastida
AT2G33480 NAC041, ANAC041 NAC domain containing protein 41 0.03 Archaeplastida
AT2G43000 NAC042, anac042 NAC domain containing protein 42 0.05 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G04070 anac047, NAC047 NAC domain containing protein 47 0.04 Archaeplastida
AT3G10500 NAC053, anac053 NAC domain containing protein 53 0.02 Archaeplastida
AT3G12910 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.05 Archaeplastida
AT3G15500 ATNAC3, ANAC055,... NAC domain containing protein 3 0.04 Archaeplastida
AT3G15510 NARS1, NAC2,... NAC domain containing protein 2 0.04 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.05 Archaeplastida
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.03 Archaeplastida
AT4G28530 anac074, NAC074 NAC domain containing protein 74 0.04 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.02 Archaeplastida
AT5G13180 VNI2, NAC083, ANAC083 NAC domain containing protein 83 0.04 Archaeplastida
AT5G18270 ANAC087 Arabidopsis NAC domain containing protein 87 0.02 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.05 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01014287001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014405001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01019993001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01020834001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01029392001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01033374001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
Gb_01126 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_01375 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_05670 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_12203 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_17883 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_20015 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_27819 No alias transcription factor (KNOX). transcription factor (NAC) 0.02 Archaeplastida
Gb_35048 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_35309 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_41026 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_41540 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_41742 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os06g51070.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os07g48450.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os08g02160.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os08g10080.1 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_10426531g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_112054g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_122815g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_123846g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_137415g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_139896g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_15204g0010 No alias transcription factor (NAC) 0.05 Archaeplastida
MA_18939g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_33912g0010 No alias transcription factor (NAC) 0.05 Archaeplastida
MA_40991g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_5017g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_5115g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_6777g0010 No alias No annotation 0.02 Archaeplastida
MA_80232g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_86256g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
MA_95225g0010 No alias transcription factor (NAC) 0.03 Archaeplastida
Mp4g11910.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp4g22890.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02620.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Mp6g02670.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g20920.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Pp3c13_10800V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c16_23260V3.1 No alias NAC domain containing protein 35 0.03 Archaeplastida
Pp3c26_13950V3.1 No alias NAC 007 0.02 Archaeplastida
Pp3c26_4660V3.1 No alias NAC domain containing protein 80 0.02 Archaeplastida
Pp3c4_20430V3.1 No alias NAC 007 0.02 Archaeplastida
Pp3c5_570V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
Pp3c5_630V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c8_6080V3.1 No alias NAC domain containing protein 2 0.02 Archaeplastida
Smo74001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
Solyc01g102740.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc02g087920.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc02g088180.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc04g005610.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc05g007550.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc05g007770.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g008360.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g060230.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g069710.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc07g062840.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc07g063410.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc07g063420.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc07g066330.3.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc08g006020.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc08g008660.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc09g025310.4.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc10g006880.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc11g018660.2.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc12g017400.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc12g036480.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e001536_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e001540_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e003559_P003 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e005094_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e007411_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e008026_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e010094_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e011934_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e012429_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e014291_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e015816_P003 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023635_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e024028_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e031694_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e034574_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e034913_P002 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e034914_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e036590_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e037088_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039246_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e040938_P001 No alias transcription factor (NAC) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 11 153
No external refs found!