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  5. LOC_Os02g57000.1

LOC_Os02g57000.1


Description : no hits & (original description: none)


Gene families : OG0000207 (Archaeplastida) Phylogenetic Tree(s): OG0000207_tree ,
OG_05_0000152 (LandPlants) Phylogenetic Tree(s): OG_05_0000152_tree ,
OG_06_0001087 (SeedPlants) Phylogenetic Tree(s): OG_06_0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57000.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00167680 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G04540 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Archaeplastida
AT2G13350 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 Archaeplastida
AT3G04360 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Archaeplastida
GSVIVT01027920001 No alias No description available 0.03 Archaeplastida
MA_18179g0010 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 94.0) 0.02 Archaeplastida
Solyc05g055920.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g028990.1.1 No alias Protein SRC2 homolog OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc09g090920.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g096970.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e017653_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000008 C2_dom 29 124
No external refs found!