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  5. AMTR_s00003p00185030

AMTR_s00003p00185030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.162

Description : Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG8 ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0010026 (LandPlants) Phylogenetic Tree(s): OG_05_0010026_tree ,
OG_06_0010821 (SeedPlants) Phylogenetic Tree(s): OG_06_0010821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00185030
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Gb_08297 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0000045 autophagosome assembly IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0016530 metallochaperone activity IEP Neighborhood
MF GO:0016531 copper chaperone activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 2 88
No external refs found!