AMTR_s00003p00187870 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.166

Description : Calcineurin B-like protein 1 OS=Oryza sativa subsp. japonica

Gene families : OG0000344 (Archaeplastida) Phylogenetic Tree(s): OG0000344_tree ,
OG_05_0000232 (LandPlants) Phylogenetic Tree(s): OG_05_0000232_tree ,
OG_06_0012767 (SeedPlants) Phylogenetic Tree(s): OG_06_0012767_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00003p00187870
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method	Actions
Zm00001e020523_P003	No alias	calcium-dependent regulatory protein SCaBP8/CBL10	0.03	Archaeplastida
Zm00001e032161_P001	No alias	Calcineurin B-like protein 4 OS=Oryza sativa subsp....	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009523	photosystem II	IEP	Neighborhood
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
CC	GO:1990204	oxidoreductase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	27	50

External Links

No external refs found!