LOC_Os02g58560.1

Description : callose synthase

Gene families : OG0000126 (Archaeplastida) Phylogenetic Tree(s): OG0000126_tree ,
OG_05_0000405 (LandPlants) Phylogenetic Tree(s): OG_05_0000405_tree ,
OG_06_0000364 (SeedPlants) Phylogenetic Tree(s): OG_06_0000364_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g58560.1
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00091520	evm_27.TU.AmTr_v1...	Callose synthase 9 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00044p00098420	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.03	Archaeplastida
AMTR_s00111p00150590	evm_27.TU.AmTr_v1...	Cell wall.callose.callose synthase	0.08	Archaeplastida
AT1G05570	GSL06, ATGSL06,...	callose synthase 1	0.03	Archaeplastida
AT2G13680	GLS2, ATGSL02, CALS5	callose synthase 5	0.02	Archaeplastida
AT2G31960	GSL03, ATGSL3, ATGSL03	glucan synthase-like 3	0.1	Archaeplastida
AT2G36850	ATGSL08, ATGSL8,...	glucan synthase-like 8	0.1	Archaeplastida
AT3G07160	ATGSL10, gsl10, CALS9	glucan synthase-like 10	0.1	Archaeplastida
AT4G04970	ATGSL01, GSL01,...	glucan synthase-like 1	0.05	Archaeplastida
Cre03.g198200	No alias	Cell wall.callose.callose synthase	0.01	Archaeplastida
Cre04.g214612	No alias	No description available	0.01	Archaeplastida
GSVIVT01000622001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
GSVIVT01007560001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
GSVIVT01025370001	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
GSVIVT01025372001	No alias	Callose synthase 9 OS=Arabidopsis thaliana	0.08	Archaeplastida
Gb_01752	No alias	callose synthase	0.04	Archaeplastida
Gb_29725	No alias	callose synthase	0.03	Archaeplastida
LOC_Os03g03610.3	No alias	callose synthase	0.03	Archaeplastida
MA_101796g0010	No alias	Callose synthase 3 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10430560g0010	No alias	Callose synthase 10 OS=Arabidopsis thaliana...	0.07	Archaeplastida
MA_10432652g0010	No alias	callose synthase	0.05	Archaeplastida
MA_10434444g0010	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	Archaeplastida
MA_2744g0020	No alias	Callose synthase 3 OS=Arabidopsis thaliana...	0.06	Archaeplastida
MA_6658221g0010	No alias	Callose synthase 12 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_9871521g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
Mp2g04240.1	No alias	callose synthase	0.01	Archaeplastida
Mp4g17120.1	No alias	callose synthase	0.03	Archaeplastida
Pp3c10_16400V3.1	No alias	glucan synthase-like 10	0.03	Archaeplastida
Pp3c10_20867V3.1	No alias	glucan synthase-like 10	0.02	Archaeplastida
Pp3c20_20533V3.1	No alias	glucan synthase-like 10	0.02	Archaeplastida
Pp3c4_15060V3.1	No alias	glucan synthase-like 5	0.01	Archaeplastida
Pp3c4_1790V3.1	No alias	glucan synthase-like 10	0.03	Archaeplastida
Smo177798	No alias	Cell wall.callose.callose synthase	0.04	Archaeplastida
Smo439692	No alias	Cell wall.callose.callose synthase	0.03	Archaeplastida
Solyc01g006350.4.1	No alias	callose synthase	0.05	Archaeplastida
Solyc01g006360.4.1	No alias	Callose synthase 9 OS=Arabidopsis thaliana...	0.1	Archaeplastida
Solyc01g073750.4.1	No alias	callose synthase	0.02	Archaeplastida
Zm00001e000142_P001	No alias	callose synthase	0.07	Archaeplastida
Zm00001e002613_P001	No alias	callose synthase	0.1	Archaeplastida
Zm00001e013336_P001	No alias	Callose synthase 3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e016291_P004	No alias	Callose synthase 3 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Zm00001e016293_P001	No alias	callose synthase	0.09	Archaeplastida
Zm00001e016297_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e020194_P001	No alias	callose synthase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Neighborhood
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
BP	GO:0002790	peptide secretion	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005887	integral component of plasma membrane	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
CC	GO:0009341	beta-galactosidase complex	IEP	Neighborhood
BP	GO:0010921	regulation of phosphatase activity	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
CC	GO:0016592	mediator complex	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0019902	phosphatase binding	IEP	Neighborhood
MF	GO:0019903	protein phosphatase binding	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0035303	regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0043015	gamma-tubulin binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051336	regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003440	Glyco_trans_48	95	786
IPR003440	Glyco_trans_48	3	94

External Links

No external refs found!

LOC_Os02g58560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation