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  5. LOC_Os03g01530.1

LOC_Os03g01530.1


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0000065 (SeedPlants) Phylogenetic Tree(s): OG_06_0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g01530.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.03 Archaeplastida
AT2G29550 TUB7 tubulin beta-7 chain 0.04 Archaeplastida
Gb_15855 No alias Tubulin beta-3 chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Smo183654 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Solyc10g085020.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Zm00001e011926_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e030351_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!