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  5. LOC_Os03g01640.1

LOC_Os03g01640.1


Description : Expansin-B10 OS=Oryza sativa subsp. japonica (sp|q8h7t4|exb10_orysj : 454.0)


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0014137 (LandPlants) Phylogenetic Tree(s): OG_05_0014137_tree ,
OG_06_0014049 (SeedPlants) Phylogenetic Tree(s): OG_06_0014049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g01640.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT2G20750 EXPB1, ATEXPB1,... expansin B1 0.03 Archaeplastida
Gb_19114 No alias beta-like-class expansin 0.02 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os10g40090.1 No alias Expansin-B9 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
MA_10427897g0010 No alias beta-class expansin 0.04 Archaeplastida
MA_78155g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.02 Archaeplastida
Smo171427 No alias Expansin-B17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc01g090820.2.1 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e002338_P001 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Zm00001e005019_P001 No alias Expansin-B12 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e037879_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e037884_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e037914_P002 No alias Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) 0.05 Archaeplastida
Zm00001e037919_P001 No alias Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 482.0) 0.06 Archaeplastida
Zm00001e037922_P001 No alias Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 484.0) 0.04 Archaeplastida
Zm00001e037923_P001 No alias Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 485.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 170 251
IPR009009 RlpA-like_DPBB 79 156
No external refs found!