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  5. LOC_Os03g01900.1

LOC_Os03g01900.1


Description : component RPS17 of SSU proteome


Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree ,
OG_05_0002018 (LandPlants) Phylogenetic Tree(s): OG_05_0002018_tree ,
OG_06_0002044 (SeedPlants) Phylogenetic Tree(s): OG_06_0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g01900.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00243530 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT2G04390 No alias Ribosomal S17 family protein 0.1 Archaeplastida
AT2G05220 No alias Ribosomal S17 family protein 0.12 Archaeplastida
AT3G10610 No alias Ribosomal S17 family protein 0.11 Archaeplastida
AT5G04800 No alias Ribosomal S17 family protein 0.08 Archaeplastida
Cre12.g498250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
GSVIVT01033920001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01034653001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
MA_184894g0010 No alias component RPS17 of SSU proteome 0.07 Archaeplastida
Mp8g18950.1 No alias component RPS17 of SSU proteome 0.1 Archaeplastida
Pp3c11_2530V3.1 No alias Ribosomal S17 family protein 0.12 Archaeplastida
Pp3c11_2540V3.1 No alias Ribosomal S17 family protein 0.13 Archaeplastida
Pp3c2_34780V3.1 No alias Ribosomal S17 family protein 0.12 Archaeplastida
Pp3c7_21070V3.1 No alias Ribosomal S17 family protein 0.03 Archaeplastida
Pp3c7_21140V3.1 No alias Ribosomal S17 family protein 0.09 Archaeplastida
Smo270936 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Solyc05g055230.2.1 No alias component RPS17 of SSU proteome 0.11 Archaeplastida
Solyc10g150146.1.1 No alias component RPS17 of SSU proteome 0.1 Archaeplastida
Solyc11g006690.1.1 No alias component RPS17 of SSU proteome 0.12 Archaeplastida
Zm00001e030769_P001 No alias component RPS17 of SSU proteome 0.07 Archaeplastida
Zm00001e036233_P001 No alias component RPS17 of SSU proteome 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 118
No external refs found!