Description : thymidine kinase (TK1)
Gene families : OG0006198 (Archaeplastida) Phylogenetic Tree(s): OG0006198_tree ,
OG_05_0006845 (LandPlants) Phylogenetic Tree(s): OG_05_0006845_tree ,
OG_06_0009728 (SeedPlants) Phylogenetic Tree(s): OG_06_0009728_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g02200.1 | |
Cluster | HCCA: Cluster_286 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc11g012480.3.1 | No alias | thymidine kinase (TK1) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004797 | thymidine kinase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | Neighborhood |
BP | GO:0006378 | mRNA polyadenylation | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
BP | GO:0031123 | RNA 3'-end processing | IEP | Neighborhood |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Neighborhood |
MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
BP | GO:0043631 | RNA polyadenylation | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001267 | Thymidine_kinase | 73 | 251 |
No external refs found! |