LOC_Os03g02200.1


Description : thymidine kinase (TK1)


Gene families : OG0006198 (Archaeplastida) Phylogenetic Tree(s): OG0006198_tree ,
OG_05_0006845 (LandPlants) Phylogenetic Tree(s): OG_05_0006845_tree ,
OG_06_0009728 (SeedPlants) Phylogenetic Tree(s): OG_06_0009728_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g02200.1
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
Solyc11g012480.3.1 No alias thymidine kinase (TK1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001267 Thymidine_kinase 73 251
No external refs found!