- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (Trihelix)
Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0000568 (SeedPlants) Phylogenetic Tree(s): OG_06_0000568_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g02240.1 | |
| Cluster | HCCA: Cluster_277 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.06 | Archaeplastida | |
| AT1G76880 | No alias | Duplicated homeodomain-like superfamily protein | 0.04 | Archaeplastida | |
| GSVIVT01019722001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.05 | Archaeplastida | |
| MA_10427500g0020 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| MA_10433499g0020 | No alias | transcription factor (Trihelix) | 0.02 | Archaeplastida | |
| MA_47951g0010 | No alias | transcription factor (Trihelix) | 0.02 | Archaeplastida | |
| MA_934266g0020 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp8g08100.1 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| Zm00001e000092_P003 | No alias | transcription factor (Trihelix) | 0.11 | Archaeplastida | |
| Zm00001e004364_P002 | No alias | transcription factor (Trihelix) | 0.13 | Archaeplastida | |
| Zm00001e007383_P001 | No alias | transcription factor (Trihelix) | 0.07 | Archaeplastida | |
| Zm00001e012540_P001 | No alias | transcription factor (Trihelix) | 0.16 | Archaeplastida | |
| Zm00001e013403_P003 | No alias | transcription factor (Trihelix) | 0.05 | Archaeplastida | |
| Zm00001e015271_P001 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida | |
| Zm00001e025402_P001 | No alias | transcription factor (Trihelix) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
| BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Neighborhood |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| CC | GO:0046658 | anchored component of plasma membrane | IEP | Neighborhood |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |