LOC_Os03g03550.1


Description : transcription factor (bZIP)


Gene families : OG0000167 (Archaeplastida) Phylogenetic Tree(s): OG0000167_tree ,
OG_05_0000303 (LandPlants) Phylogenetic Tree(s): OG_05_0000303_tree ,
OG_06_0002287 (SeedPlants) Phylogenetic Tree(s): OG_06_0002287_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g03550.1
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00170620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.02 Archaeplastida
GSVIVT01001783001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 Archaeplastida
GSVIVT01014246001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.04 Archaeplastida
LOC_Os01g11350.1 No alias transcription factor (bZIP) 0.03 Archaeplastida
MA_107919g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_170065g0010 No alias transcription factor (bZIP) 0.02 Archaeplastida
MA_23986g0010 No alias transcription factor (bZIP) 0.02 Archaeplastida
MA_4209653g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6407g0010 No alias transcription factor (bZIP) 0.03 Archaeplastida
Pp3c6_7520V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 Archaeplastida
Pp3c7_23340V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.02 Archaeplastida
Pp3c8_11470V3.1 No alias Basic-leucine zipper (bZIP) transcription factor family protein 0.03 Archaeplastida
Solyc11g020950.3.1 No alias transcription factor (bZIP) 0.02 Archaeplastida
Zm00001e003742_P001 No alias transcription factor (bZIP) 0.03 Archaeplastida
Zm00001e010978_P001 No alias transcription factor (bZIP) 0.04 Archaeplastida
Zm00001e029031_P001 No alias transcription factor (bZIP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004827 bZIP 277 335
No external refs found!