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LOC_Os03g04020.1


Description : alpha-like-class expansin


Gene families : OG0006085 (Archaeplastida) Phylogenetic Tree(s): OG0006085_tree ,
OG_05_0004137 (LandPlants) Phylogenetic Tree(s): OG_05_0004137_tree ,
OG_06_0002513 (SeedPlants) Phylogenetic Tree(s): OG_06_0002513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g04020.1
Cluster HCCA: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240270 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.02 Archaeplastida
AT4G38400 ATEXPL2, EXPL2,... expansin-like A2 0.03 Archaeplastida
Gb_29324 No alias alpha-like-class expansin 0.02 Archaeplastida
LOC_Os10g39640.1 No alias alpha-like-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 247
IPR009009 RlpA-like_DPBB 76 136
No external refs found!